Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 338 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 68/326 (20%), Positives = 129/326 (39%), Gaps = 33/326 (10%)

Query: 1   MKGSPSLLLVALLSAPLLAQAAEPEQCQT-VRFSDVGWTDITVTTATTSVVLEALGYKTH 59
           MKG  +LL  +L +  L   A      +  V F+D+ W   ++ T    V++E  GY   
Sbjct: 1   MKGLKTLLAASLTTLGLSVAALPVSAAEAPVHFADLNWESGSLITEVLRVIVEK-GYDLP 59

Query: 60  T-TMISVPVTYKSLATGKDLDVFLGNWM---PTMENDIKQYRDAGTVETVRANLENAKYT 115
           T T+    +T ++     D+ V    W    P       + +  G  +TV+   E     
Sbjct: 60  TDTLPGTTITLETALAKNDIQVIGEEWAGRSPVWVKAEAEGKVVGLGDTVKGATEGWWVP 119

Query: 116 LAVPQALYDKG-------LKDFSDIPKFKK-----ELDGKIYGIEPGNDGNRTIQSMIDK 163
             V +    KG       LK   D+ ++K      E  GK   +         + +    
Sbjct: 120 EYVVKGDPAKGIKPLAPELKSVKDLARYKDVFKDPESPGKGRFLNSPIGWTSEVVNKQKL 179

Query: 164 NAFGLKDAGFKIVQSSEAGMLSQVDRAQKRGEALVFLGWEPHPMNTRFKM---------- 213
            A+GL D+       S A + +++  + +RG+ ++F  W P P+  R+K+          
Sbjct: 180 KAYGLDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFDA 239

Query: 214 ---QYLTGGDD-FFGPDFGKATVLT-NTRKGYTQECSNVGQLLKNLSFELKDESTMMGYV 268
              + LT  D+    P    A+ L+      + +E   + Q  + + F ++  +  +  +
Sbjct: 240 EAWKTLTDADNPNPKPTRSLASKLSIGVSTPFQKEHPQIAQFFEKVEFPIEPLNKALATM 299

Query: 269 LDDKMKPEAAAKKWIKDNPGKLDAWL 294
            ++   P   A+ ++K++P    AWL
Sbjct: 300 SENHTAPREVAQMFLKEHPQVWKAWL 325