Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 299 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 12  LLSAPLLAQAA--EPEQCQTVRFSDVGWTDITVTTATTSVVL-EALGYKTHTTMISVPVT 68
           LL   L A AA  + E+   VR   V W+D  +T    S  L E L       M  + + 
Sbjct: 15  LLGLALGASAAVTQAEEKPPVRIGWVNWSDTEITVKLASTALQEHLKQSVKLVMADIGIQ 74

Query: 69  YKSLATGKDLDVFLGNWMPTMENDI-KQYRDAGTVETVRANLENAKYTLAVPQALYDKGL 127
           +++LA G ++D+    W+P+       +Y+D   +E +   L   +  +AVP ++    +
Sbjct: 75  FQALANG-NIDLIPMVWLPSTHKAFYDKYKDR--LEDLGV-LYEGRIGMAVPTSVPVAEV 130

Query: 128 KDFSDI--PKFKKELDGKIYGIEPGNDG-NRTIQSMIDKNAFGLKDAGFKIVQSSEAGML 184
               D+  P  +++ DGKI   E GN     T++++ D      K  G+K+V SSE+GML
Sbjct: 131 ASVEDLNKPGIREKFDGKILTSEVGNGQYTLTVKAIED-----YKLTGYKLVGSSESGML 185

Query: 185 SQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQEC 244
           +++DR  KR +  +   W PH M +++ ++YL      FG   G   +    RKG++QE 
Sbjct: 186 NEMDRNLKRDKWSLVNAWSPHWMFSKWSLRYLEDPKQIFG---GAEQIHAMARKGFSQEH 242

Query: 245 SNVGQLLKNLSFELKDESTMM 265
             V     + S    D   +M
Sbjct: 243 PEVAYFFAHFSLPQADLEALM 263