Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 3e-28
 Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 20/293 (6%)

Query: 3   GSPSLLLVALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEA-LGYKTHTT 61
           G+ + L+VA+ S      A+   +  ++ + D GW+D   TT   + V+++ LGY     
Sbjct: 8   GAAATLVVAMSST----LASADSKTLSIGYVD-GWSDSVATTHVAAEVIKSKLGYDVKLQ 62

Query: 62  MISVPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQA 121
            ++  + ++ +ATGK LD  L  W+P    +    ++   V     N ++AK  L VP+ 
Sbjct: 63  AVATGIMWQGVATGK-LDAMLSAWLPVTHGEYWA-KNKDKVVDYGPNFKDAKIGLIVPEY 120

Query: 122 LYDKGLKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEA 181
           +  K ++D      FK     KI GI+ G+         I +  +GL    +K+  SS A
Sbjct: 121 VKAKSIEDLKTDTTFKN----KIVGIDAGSGVMLKTDEAIKQ--YGLD---YKLQASSGA 171

Query: 182 GMLSQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYT 241
            M++++ RA+ + E++   GW PH M  ++K+++L      +G      TV +   KG  
Sbjct: 172 AMIAELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDPKGIYG---AAETVNSIGSKGLE 228

Query: 242 QECSNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWL 294
           ++   V   LK   +  KDE   +   + +  KP+AAAK W+  +P ++  W+
Sbjct: 229 KKAPEVAAFLKKFQWASKDEIGEVMLAIQEGAKPDAAAKDWVAKHPERVAEWV 281