Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 72/329 (21%), Positives = 126/329 (38%), Gaps = 38/329 (11%)

Query: 1   MKGSPSLLLVALLSAPLLA--QAAEPEQCQTVRFSDVGWTDITVTTATTSVVLE-ALGYK 57
           MK   +LL   LL+  L +   AA  EQ   + F  +GW    +TT    +++E   GY+
Sbjct: 1   MKSISTLLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYR 60

Query: 58  THTTMISVPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLA 117
           T T   S      +LA   DL V    W       +K    AG V  +   ++NA+    
Sbjct: 61  TDTLPGSTVSMEVALARN-DLQVIAEEWAGRSPAWVKA-EQAGQVFALGDTVKNAEEGWW 118

Query: 118 VPQALYDKG-----------LKDFSDIPKFKK-----ELDGKIYGIE-PGNDGNRTIQSM 160
           VP  + +             L    D+ ++ +     E  GK   +  P    + T+ S 
Sbjct: 119 VPAYVIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQ 178

Query: 161 IDKNAFGLKDAGFKIVQSSEAGMLSQVDRAQKRGEALVFLGWEPHPMNTRFKMQYL---- 216
             K A+GL          S A M +++  A +RG+ ++F  W P P+  R+K+  L    
Sbjct: 179 KLK-AYGLDGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEEPP 237

Query: 217 -----------TGGDDFFGPDFGKATVLTNTRKGYTQECSNVGQLLKNLSFELKDESTMM 265
                          +  G     A +     K + +   ++  + + +   +   +  +
Sbjct: 238 FDAQAWATLTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKAL 297

Query: 266 GYVLDDKMKPEAAAKKWIKDNPGKLDAWL 294
             + + +  P  AA  +++DN     AWL
Sbjct: 298 AVMSEKRTPPREAALTFLRDNREVWKAWL 326