Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 1e-26
 Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 23/287 (8%)

Query: 11  ALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTT-ATTSVVLEALGYKTHTTMISVPVTY 69
           AL+ A   AQA   E   ++ + D GW D   TT     V+ + LGY      ++  + +
Sbjct: 17  ALVMAMSAAQAMAKEV--SIGYVD-GWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMW 73

Query: 70  KSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQALYDKGLKD 129
           + +ATGK LD  L  W+P    +    ++   V     N ++AK  L VP+ +    + D
Sbjct: 74  QGVATGK-LDAMLSAWLPVTHGEYWA-KNKDNVVDYGPNFKDAKIGLIVPEYVKAVSIAD 131

Query: 130 FSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAG---FKIVQSSEAGMLSQ 186
                 FK     +I GI+ G+        ++ K    +KD G   +K+  SS A M ++
Sbjct: 132 LKTDNSFKD----RIVGIDAGS-------GVMLKTDQAIKDYGLTSYKLQASSGAAMTAE 180

Query: 187 VDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQECSN 246
           + RA  + +++   GW PH M  ++K+++L      +G      TV +   K    +   
Sbjct: 181 LGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYG---AAETVNSIGSKELATKAPE 237

Query: 247 VGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAW 293
           V + LK  +++ KDE   +   + +  KPEAAAK W+  +P ++  W
Sbjct: 238 VAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVAKHPDRVKEW 284