Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 315 a.a., choline ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  261 bits (668), Expect = 1e-74
 Identities = 136/310 (43%), Positives = 201/310 (64%), Gaps = 4/310 (1%)

Query: 1   MKGSPSLLLVALLS-APLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTH 59
           MK    L+L+A+    PL + A +  +C TV  SD GWTDI  T A + VVL ALGY+  
Sbjct: 3   MKRITQLVLLAVAGWFPLSSFAVDDARCATVTQSDPGWTDIAATNAISGVVLNALGYQQK 62

Query: 60  TTMISVPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVP 119
              +SV + ++ L TG+ +DVFLGNWMP     I ++   G++  + ANL  A++TLAVP
Sbjct: 63  VQNLSVALAFQGLKTGQ-VDVFLGNWMPAQAPVISKFTADGSISVLGANLPAARFTLAVP 121

Query: 120 QALYDKGLKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSS 179
             +   G+KDF+D+ K+  + D KIYGI PG   N++++ MID + F L++  + +V+SS
Sbjct: 122 DYVAAAGVKDFADLQKYANQFDHKIYGIAPGAPANQSLKKMIDAHDFALQN--WSLVESS 179

Query: 180 EAGMLSQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKG 239
           E+GML+QV RA +R + +VFLGWEPH MNTRFK+ YL+GGD++FG ++G+ATV T TRK 
Sbjct: 180 ESGMLAQVTRAVERKQWIVFLGWEPHAMNTRFKLAYLSGGDNYFGANYGRATVNTVTRKD 239

Query: 240 YTQECSNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTT 299
           +   C N+ +    L+F++  E+ ++  VL+ +   + AA+  +K  P  LD+WL GVTT
Sbjct: 240 FAATCPNLNRFYSQLTFDVALENAVIARVLEQQQTAQDAARDELKKRPELLDSWLEGVTT 299

Query: 300 VDGKPGLEAV 309
             G+P   AV
Sbjct: 300 RTGEPAKPAV 309