Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 18/220 (8%)

Query: 53  VLIALFAALAHFIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPL 112
           V++AL A L H+I           L F L  +L            V  + +  +V+G+P 
Sbjct: 14  VVVALLALLVHWIGINTIELYRDDLLFYLQAHL----------ILVLVSMLAALVVGIPA 63

Query: 113 GILAAHKPMFYTAMR--PVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIR 170
           GIL +   M   A R   + ++  TVP    L   L + G+G  P + +  + ++   +R
Sbjct: 64  GILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIGSGPAIFALFLASLLPIVR 123

Query: 171 LTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAAL 230
            TY G+ +V   L +A    G + RQ+L R+ELP+A+P I  GV   + +++    +A L
Sbjct: 124 NTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIGGVRVALAINVGTAPLAFL 183

Query: 231 VGADGLGK---PVVNALNTADISLGFEAGLAIVLLAIMLD 267
           +GA+ LG    P +   N   + LG        LLA++LD
Sbjct: 184 IGANSLGSLIFPGIALNNQPQLLLG---AACTALLALLLD 220