Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score =  211 bits (537), Expect = 2e-59
 Identities = 117/269 (43%), Positives = 166/269 (61%), Gaps = 3/269 (1%)

Query: 2   LIDQKIPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAAL 61
           L D  +P+  +I   + W+ ++   +F  +   ++  ++ V S LT      +IAL    
Sbjct: 75  LWDGSLPIESWINQGLGWVVEHFRPFFQTVRLPIDSTLNSVQSLLTGLPTLAMIALIGLF 134

Query: 62  A-HFIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKP 120
           A  F  R  A+   VAL  LL+  LG W E M TL+ V  + V C+VIG+PLG+L A   
Sbjct: 135 AWQFAGRALAIGTTVAL--LLVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSD 192

Query: 121 MFYTAMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVP 180
                MRPVLD MQT P FVYL+P + LFG+G VPG+I T++FA+A  +RLT LG+  V 
Sbjct: 193 RAQRIMRPVLDAMQTTPAFVYLVPVVMLFGIGNVPGVIVTIIFALAPLVRLTNLGLRQVR 252

Query: 181 QELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPV 240
            +L++A +A+G S  Q+L +++LP AMPSI AG+ Q +MLSLSMVVIA+++   GLG+ V
Sbjct: 253 PDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMV 312

Query: 241 VNALNTADISLGFEAGLAIVLLAIMLDRI 269
           +  +   D+ L    GL IVLLAI LDR+
Sbjct: 313 LRGIGRLDMGLATVGGLGIVLLAISLDRL 341