Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score =  176 bits (446), Expect = 1e-48
 Identities = 108/270 (40%), Positives = 161/270 (59%), Gaps = 9/270 (3%)

Query: 4   DQKIPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAH 63
           D  +     I + + W      + F  +   +  +I+GV  AL +  P+ + AL  AL +
Sbjct: 420 DSMLAAAGAIDALIGWSQVTFESAFVGVIVAVRTVINGVEGALGWI-PWPVPAL--ALVY 476

Query: 64  FIQRK----WALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHK 119
              R      ALT  +AL ++ +   G+W+ T+ T+A V  + ++ ++IG+P GIL A +
Sbjct: 477 LAWRSAGAILALTTALALGYIGLF--GFWERTISTIALVGASVLLSLLIGIPTGILLAKR 534

Query: 120 PMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDV 179
            +    + P+LD+MQT+PTFVYLIP +  F +G  P +I+TV+FA+A  IRLT LGI +V
Sbjct: 535 ALARRLVTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFALAPMIRLTALGIQEV 594

Query: 180 PQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKP 239
           P+  ++A  A G +  Q LTR+ELP A  S+  GV Q I++SLSMVV+AAL+GA GLG  
Sbjct: 595 PKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTIVMSLSMVVVAALIGAGGLGYD 654

Query: 240 VVNALNTADISLGFEAGLAIVLLAIMLDRI 269
           V+ AL       G  AG+AIV  A++ DRI
Sbjct: 655 VMTALRNIKGGEGVLAGIAIVFCALVPDRI 684