Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 354 a.a., glycine betaine/proline ABC transporter permease from Escherichia coli BL21

 Score =  203 bits (516), Expect = 5e-57
 Identities = 107/263 (40%), Positives = 163/263 (61%), Gaps = 1/263 (0%)

Query: 7   IPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQ 66
           IPL  ++   ++W+  +    F  +   ++++++G    L      V I +FA +A  I 
Sbjct: 62  IPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQIS 121

Query: 67  RKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAM 126
               +     +S + I  +G W + M TLA V  A + C+VIG+PLGI  A  P     +
Sbjct: 122 GV-GMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII 180

Query: 127 RPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDA 186
           RP+LD MQT P FVYL+P + LFG+G VPG++ T++FA+   IRLT LGI  VP +L++A
Sbjct: 181 RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA 240

Query: 187 GKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNT 246
            ++FG S RQ+L +++LP AMP+I AGV Q +ML+LSMVVIA+++   GLG+ V+  +  
Sbjct: 241 SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR 300

Query: 247 ADISLGFEAGLAIVLLAIMLDRI 269
            D+ L    G+ IV+LAI+LDR+
Sbjct: 301 LDMGLATVGGVGIVILAIILDRL 323