Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 320 a.a., Glycine betaine/choline transport system permease protein OusW from Azospirillum sp. SherDot2

 Score =  194 bits (494), Expect = 2e-54
 Identities = 106/269 (39%), Positives = 159/269 (59%), Gaps = 1/269 (0%)

Query: 8   PLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQR 67
           P+  +I   V W+  N    F AI   +E++++ +   L    PF+ I   A L  +   
Sbjct: 11  PVDAWIQDGVAWIALNLRPLFLAIKWPVEYVLN-LNIFLLQEIPFLAIVAVAVLLAWRLA 69

Query: 68  KWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMR 127
              +  F A++ + I  LG W E M TL+ +T A V+C  IG+P+GI  A     +  +R
Sbjct: 70  SLGVACFSAVALVAIAALGVWSEAMTTLSLITTAIVICAAIGIPIGIGCARSDRMWGVVR 129

Query: 128 PVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAG 187
           P+LD+MQT PTFVYL+P + LFG+G VPG ++ V  A    IR T LGI  V  E+++AG
Sbjct: 130 PILDIMQTTPTFVYLVPVVMLFGVGTVPGEVAVVTAAAPPLIRFTNLGIRMVETEMVEAG 189

Query: 188 KAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTA 247
            AFG ++RQLL  ++LP A+P+I  G+ Q ++ ++ M V+ A++GA+GLG  V+  L   
Sbjct: 190 LAFGATKRQLLWEVQLPLAVPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVLQGLGRL 249

Query: 248 DISLGFEAGLAIVLLAIMLDRICKQPELP 276
           D+      G+AIVLLA+MLDRI ++   P
Sbjct: 250 DVGRAAVGGIAIVLLAMMLDRITQKMAQP 278