Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score =  293 bits (751), Expect = 3e-84
 Identities = 147/270 (54%), Positives = 198/270 (73%)

Query: 4   DQKIPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAH 63
           + ++P+G+Y    ++WLT N A +FD ++   + +I+ +   L   +P +++A+  AL+ 
Sbjct: 68  ENRLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALSA 127

Query: 64  FIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFY 123
           + +R   +  F AL  LLI+NLGYW+ T ETLA V  A+ VC++IG+PLGILAA +   Y
Sbjct: 128 WTRRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIY 187

Query: 124 TAMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQEL 183
             MRP LDLMQT+PTFVYLIP L LFGLG+VPGLI+TV+FAI AP+RLT LGI   P  L
Sbjct: 188 AGMRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPAL 247

Query: 184 MDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNA 243
           ++A  AFG +  Q+L ++ELP A P I AG+TQ IMLSLSMVVI+ALVGA+GLG PVV A
Sbjct: 248 VEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRA 307

Query: 244 LNTADISLGFEAGLAIVLLAIMLDRICKQP 273
           LNT +I++GFEAGL IV+LAI+LDR+ + P
Sbjct: 308 LNTVNIAMGFEAGLCIVILAIVLDRLFRLP 337