Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  199 bits (507), Expect = 5e-56
 Identities = 105/250 (42%), Positives = 159/250 (63%), Gaps = 2/250 (0%)

Query: 20  LTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIAL-FAALAHFIQRKWALTAFVALS 78
           + +N  +  D I   L+  ++  +  L    P+++  L   A+ H   R + +T   A+S
Sbjct: 36  IVRNYGDAIDVIVHPLQLFLNA-SERLFIETPWIITMLVILAIVHLAGRSFKITGGTAIS 94

Query: 79  FLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPT 138
             +I  +G W++ M TL+ VT AT++ +VIG+PLGIL          + PVLD+MQT+P+
Sbjct: 95  LFMIGAVGLWRDAMTTLSIVTIATLIAIVIGLPLGILMGRSERLQRLINPVLDVMQTLPS 154

Query: 139 FVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLL 198
           FVYLIP + +FG+G VPGLI+ V++AI   IRLT LGI  V +E+++A  AFG S  Q L
Sbjct: 155 FVYLIPVVVIFGIGKVPGLIAVVIYAIPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKL 214

Query: 199 TRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLA 258
             ++LP A+P+I  G+ Q IM++L+MVV+A++VG  GLGK V+ A+N    ++GF  G A
Sbjct: 215 FNVQLPLALPTIMTGINQTIMMALAMVVVASMVGVGGLGKNVLQAINNQFFTVGFLNGFA 274

Query: 259 IVLLAIMLDR 268
           +V +AIM DR
Sbjct: 275 LVAIAIMFDR 284