Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 392 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  660 bits (1702), Expect = 0.0
 Identities = 334/392 (85%), Positives = 360/392 (91%)

Query: 1   MSIIRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMG 60
           MSIIRF+ VDVIFS  PREAL LLDQG +R +ILK+TG +VGVEKA+LDI KGEICVLMG
Sbjct: 1   MSIIRFDKVDVIFSKDPREALKLLDQGMSRNEILKKTGQIVGVEKASLDIEKGEICVLMG 60

Query: 61  LSGSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFAL 120
           LSGSGKSSLLRCINGLNTVSRG+LFVEHEG+ IDIA+C+ AELKMMRTKRIAMVFQKFAL
Sbjct: 61  LSGSGKSSLLRCINGLNTVSRGQLFVEHEGRQIDIASCTPAELKMMRTKRIAMVFQKFAL 120

Query: 121 MPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLAR 180
           MPWLTVRENISFGLEMQGRPEK+RRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLAR
Sbjct: 121 MPWLTVRENISFGLEMQGRPEKDRRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLAR 180

Query: 181 ALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAI 240
           ALAMDADILLMDEPFSALDPLIRQGLQDELL LQ KLSKTIVFVSHDLDEALKLG+RIAI
Sbjct: 181 ALAMDADILLMDEPFSALDPLIRQGLQDELLELQRKLSKTIVFVSHDLDEALKLGSRIAI 240

Query: 241 MKDGRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMRSLDNCKRVNGSVCLDP 300
           MKDG+IIQYS PEEIVLNPAD+YVRTFVAHTNPLNVLCGRSLMR+LDNCKRVNGSVCLDP
Sbjct: 241 MKDGKIIQYSVPEEIVLNPADDYVRTFVAHTNPLNVLCGRSLMRTLDNCKRVNGSVCLDP 300

Query: 301 GIDSWLDLGEGGALKRARQGQNGLDMQKWAPGQDVELLERRPTVVHADIGMREALQIRYQ 360
           G DSWLDL EG  +K ARQ    +++Q W PGQ VE L R PT+V ++IGMR+ALQIRY 
Sbjct: 301 GGDSWLDLAEGNTIKGARQNGAVMNLQNWVPGQAVEGLGRVPTLVDSNIGMRDALQIRYH 360

Query: 361 TGNKLVLQDNDRVVGILGDTELYHALLGKNHG 392
           TGNKLVL DN++VVGILGD+ELYHALLGKN G
Sbjct: 361 TGNKLVLHDNNQVVGILGDSELYHALLGKNLG 392