Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

 Score =  167 bits (422), Expect = 6e-46
 Identities = 102/267 (38%), Positives = 149/267 (55%), Gaps = 13/267 (4%)

Query: 33  ILKQTGLVVGVEKANLDINKGEICVLMGLSGSGKSSLLRCINGLNTVSRGKLFVEHEGKH 92
           + K  G    V   NL + KGE   L+G SG GK++ L+ I G   VS G+  +E  GK 
Sbjct: 9   VTKFYGATRAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGR--IELAGKD 66

Query: 93  IDIANCSAAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKL 152
           I  A  +        T+ + +VFQ +AL P +TV +N+SFGLEM+  P+ ER + V + L
Sbjct: 67  ITHAKAN--------TRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQAL 118

Query: 153 ELVGLTQWRNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLG 212
            LV L     + P ELSGG +QRV LARAL ++  +LL+DEP S LD  +R+ +Q EL  
Sbjct: 119 ALVHLEAHAARYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQ 178

Query: 213 LQAKLSKTIVFVSHDLDEALKLGTRIAIMKDGRIIQYSKPEEIVLNPADEYVRTFVAHTN 272
           +Q K+  T V V+HD  EA+ +  R+ +M+ G   Q   P+ +  +P+  ++ TFV   N
Sbjct: 179 IQRKVGTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKAN 238

Query: 273 PLNVLCGRSLMRSLDNCKRVNGSVCLD 299
            L+  C  S   +   C  V G++ LD
Sbjct: 239 LLD--CRVSGSGAARTCVEV-GALSLD 262