Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 418 a.a., Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score =  267 bits (683), Expect = 4e-76
 Identities = 143/265 (53%), Positives = 189/265 (71%), Gaps = 4/265 (1%)

Query: 4   IRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLSG 63
           I  + V  +F ++P +AL L+ QG ++++IL +TG  +GV  A  +I  GEI V+MGLSG
Sbjct: 5   ILIDHVFKVFGDEPEQALELVRQGLSKKEILARTGQSIGVFDATFEIQAGEIFVIMGLSG 64

Query: 64  SGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMPW 123
           SGKS+L+R +N L   + G++ ++      DI   S A L+ +R K I+MVFQ FALMP 
Sbjct: 65  SGKSTLVRLLNRLIEPTAGRIVIDGA----DINEHSDARLRALRRKDISMVFQSFALMPH 120

Query: 124 LTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARALA 183
           +TVREN +FGLE+ G  +KER    D+ L  VGL  W    PDELSGGMQQRVGLARALA
Sbjct: 121 MTVRENTAFGLELSGTGKKERLAQADKALAQVGLAGWGASYPDELSGGMQQRVGLARALA 180

Query: 184 MDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIMKD 243
            D  ILLMDE FSALDP+IR  +Q ELL LQ +  +TIVF+SHDLDEA+++G RIAIMKD
Sbjct: 181 SDPSILLMDEAFSALDPIIRTEMQSELLRLQQEQRRTIVFISHDLDEAMRIGDRIAIMKD 240

Query: 244 GRIIQYSKPEEIVLNPADEYVRTFV 268
           G++IQ   P+EI+ +PA++YVR+FV
Sbjct: 241 GQVIQVGTPDEILRSPANDYVRSFV 265