Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 342 a.a., KEGG: putative spermidine/putrescine transport system ATP-binding protein from Variovorax sp. SCN45

 Score =  171 bits (433), Expect = 3e-47
 Identities = 92/231 (39%), Positives = 145/231 (62%), Gaps = 10/231 (4%)

Query: 38  GLVVGVEKANLDINKGEICVLMGLSGSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIAN 97
           G   G+   +LD+  GE+  ++G SGSGKS+LL+ ++GL T   G++ ++ E    D++ 
Sbjct: 14  GSTHGLHDVSLDVRTGELVAVIGPSGSGKSTLLKLVSGLETGHTGRIALDGE----DMSR 69

Query: 98  CSAAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGL 157
               +      + I MVFQ +AL P L+V +N+++GL+++     ERR+   E L++VGL
Sbjct: 70  TPVHQ------RNIGMVFQSYALFPHLSVLDNVAYGLKLRKVGTAERRQRAQELLDIVGL 123

Query: 158 TQWRNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKL 217
             +  +   +LSGG QQRV LARALA+D   LL+DEP SALD  +R  L+D++  +Q + 
Sbjct: 124 GDFSARAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHLRDQIRSIQQRF 183

Query: 218 SKTIVFVSHDLDEALKLGTRIAIMKDGRIIQYSKPEEIVLNPADEYVRTFV 268
           + T + V+HD +EAL +  R+A++KDGR++Q + P +I  NPA   V  FV
Sbjct: 184 NATTLLVTHDQEEALVMADRVAMLKDGRLLQIATPRDIYENPASRAVAEFV 234