Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 385 a.a., ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

 Score =  177 bits (449), Expect = 5e-49
 Identities = 98/256 (38%), Positives = 153/256 (59%), Gaps = 10/256 (3%)

Query: 40  VVGVEKANLDINKGEICVLMGLSGSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCS 99
           V  V+  +L +N+GEICV +G SG GKS+ L+ IN L T + G++F+  E    D     
Sbjct: 18  VKAVDSVSLTVNEGEICVFLGPSGCGKSTTLKMINRLITPTSGQVFINGE----DTTGLD 73

Query: 100 AAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLT- 158
              L+    + I  V Q+  L P +T+ ENI+    + G  +++  +   E + ++ L  
Sbjct: 74  EVTLR----RHIGYVIQQIGLFPNMTIEENITVVPRLLGWDKQKCHERARELMHMIKLEP 129

Query: 159 -QWRNKKPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKL 217
            Q+  + P ELSGG QQR+G+ RALA DA +LLMDEPF A+DP+ R+ +Q+E   +Q  L
Sbjct: 130 KQYLQRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINREMIQNEFFEMQRAL 189

Query: 218 SKTIVFVSHDLDEALKLGTRIAIMKDGRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVL 277
           +KT++ VSHD+DEA+KLG +IAI + G+++Q   P+ ++ +PAD++V  FV   + L  L
Sbjct: 190 NKTVIMVSHDIDEAIKLGDKIAIFRAGKLLQLDHPDTLLAHPADDFVSNFVGQDSTLKRL 249

Query: 278 CGRSLMRSLDNCKRVN 293
                  + DN   V+
Sbjct: 250 LLVRAEDAADNAPSVS 265