Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 353 a.a., glycine betaine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  221 bits (563), Expect = 2e-62
 Identities = 119/261 (45%), Positives = 170/261 (65%), Gaps = 4/261 (1%)

Query: 12  IFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLSGSGKSSLLR 71
           IF +K    +  +  G ++ ++    G V+G+   N+ +  G+I V+MGLSGSGKS+L+R
Sbjct: 14  IFGSKAANHVEAVKAGMSKAELNTTHGHVLGLRDINITMPGGQITVIMGLSGSGKSTLIR 73

Query: 72  CINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMPWLTVRENIS 131
            +N L   + G++         D+   + A+L   R  + AMVFQKF L+P   V +N+ 
Sbjct: 74  HVNRLIDPTAGEILYGGT----DVCRLNEADLLEFRRHKTAMVFQKFGLLPHRNVLQNVV 129

Query: 132 FGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARALAMDADILLM 191
           +GLE+QG  ++ER +  +  +  VGL  + N  P++LSGGMQQRVGLARAL  +A+ILLM
Sbjct: 130 YGLEVQGIDKREREERAEVWIRRVGLEGFSNHYPNQLSGGMQQRVGLARALTNNAEILLM 189

Query: 192 DEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIMKDGRIIQYSK 251
           DE +SALDPLIR  +Q  LL LQ +L KT+VF++HDLDEAL+LG +IAI++DG IIQ   
Sbjct: 190 DEAYSALDPLIRVDMQTVLLELQKELKKTVVFITHDLDEALRLGDKIAILRDGEIIQQGT 249

Query: 252 PEEIVLNPADEYVRTFVAHTN 272
             EIV++PAD Y+  FV   N
Sbjct: 250 AAEIVMSPADSYIEAFVEEVN 270