Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 277 a.a., proline/glycine betaine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  240 bits (613), Expect = 3e-68
 Identities = 126/268 (47%), Positives = 184/268 (68%), Gaps = 4/268 (1%)

Query: 1   MSIIRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMG 60
           M+ I   +V  IF    + AL++  QG  +  IL +TG  VG++  +LDI  G I V+MG
Sbjct: 1   MTDIHIRNVSKIFGGNWKAALSMAQQGAEKSAILAKTGCSVGLDNVSLDIEAGRIFVIMG 60

Query: 61  LSGSGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFAL 120
           LSGSGKS+L+R IN L   + G++ V  +    ++    A EL+  R +R++MVFQ F L
Sbjct: 61  LSGSGKSTLVRHINRLIEPTSGEILVGGD----NVLALKAKELRDFRNRRVSMVFQNFGL 116

Query: 121 MPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLAR 180
           MP  TV +N+ +G  ++G  + + R +  + +E VGL+ + +K P +LSGGM+QRVGLAR
Sbjct: 117 MPHRTVLQNVVYGQRVRGLTKADARPIGMKWIETVGLSGYEDKFPHQLSGGMKQRVGLAR 176

Query: 181 ALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAI 240
           ALA D D++LMDE FSALDPLIR  +QD+LL L+  L KTIVF++HDLDEAL++G +IAI
Sbjct: 177 ALAADTDVILMDEAFSALDPLIRADMQDQLLQLEKNLHKTIVFITHDLDEALRIGAQIAI 236

Query: 241 MKDGRIIQYSKPEEIVLNPADEYVRTFV 268
           +KDG+++Q   P++I+ +PA++YV  FV
Sbjct: 237 LKDGKLVQVGTPDQILNSPANDYVARFV 264