Pairwise Alignments

Query, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 365 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  233 bits (594), Expect = 7e-66
 Identities = 132/285 (46%), Positives = 180/285 (63%), Gaps = 4/285 (1%)

Query: 4   IRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLSG 63
           I  +++  IF   P + L  +  G  + ++  +   V+G+   N+ +  G+I V+MGLSG
Sbjct: 5   IEIKNLYKIFGKHPEKYLEAVRSGMDKVELNDKHNHVLGLNNINITMPGGKITVVMGLSG 64

Query: 64  SGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMPW 123
           SGKS+L+R IN L   + G++  + E    DI   S + L+  R  + AMVFQKF L+P 
Sbjct: 65  SGKSTLIRHINRLIDPTAGEVLYDGE----DICGMSTSALRKFRRHKTAMVFQKFGLLPH 120

Query: 124 LTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARALA 183
            TV EN  +GL++QG P KE        L  VGL  + +  P++LSGGMQQRVGLARALA
Sbjct: 121 RTVLENSVYGLDIQGVPRKESETKGRYWLNRVGLDGYEDYYPNQLSGGMQQRVGLARALA 180

Query: 184 MDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIMKD 243
            DADILLMDE +SALDPLIR  +Q  LL LQ +L KT+VF++HDLDEAL+LG  IAI+KD
Sbjct: 181 NDADILLMDEAYSALDPLIRVDMQTMLLDLQQELKKTVVFITHDLDEALRLGDHIAILKD 240

Query: 244 GRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMRSLDN 288
           G ++Q    + I+L+PAD YV  FV   N   VL   ++M  LD+
Sbjct: 241 GEVVQQGDGQSIILSPADGYVTDFVRDVNRSRVLQATTVMEPLDS 285