Pairwise Alignments

Query, 461 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 467 a.a., aromatic amino acid transporter from Pseudomonas simiae WCS417

 Score =  301 bits (772), Expect = 2e-86
 Identities = 165/425 (38%), Positives = 245/425 (57%), Gaps = 11/425 (2%)

Query: 5   NSNDLAQGLKQRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRML 64
           N   L +GLK RH+ ++++ G IG GLF+GS   + +AGP+++L YA AG +  L+MR L
Sbjct: 7   NPVGLKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSAGPSMILGYAIAGFIAFLIMRQL 66

Query: 65  GEMAVASPDTGSFSTYADRAIGRWAGFTIGWLYWWFWVLVIPLEANAAAAILHAWFPAVD 124
           GEM V  P  GSFS +A +  G +AGF  GW YW  +VLV   E  A    +  W+P + 
Sbjct: 67  GEMIVEEPVAGSFSHFAHKYWGGYAGFLAGWNYWVLYVLVGMAELTAVGKYIQFWWPDIP 126

Query: 125 LWAFSLIITLALTLTNLCSVKNYGEFEFWFALLKVLAIIGFIAVGCAALFGFVPSSQVSG 184
            W  +L+  +A+ L N  +VK +GE EFWFA++KV+AI+G I +GC  LF      Q S 
Sbjct: 127 TWVSALVFFVAVNLINTLNVKFFGETEFWFAIIKVVAIVGMIVLGCYLLFSGTGGPQAS- 185

Query: 185 TSHLFDTQGFMPNGLGAVLAAMLTTMFSFMGTEIVTIAAAESKDPGKQISRATNSVIWRI 244
            S+L+   GF PNG   +L +M   MFSF G E+V I AAE+ +P K I +A N V++RI
Sbjct: 186 VSNLWSHGGFFPNGGMGLLMSMAFIMFSFGGLELVGITAAEASEPRKVIPKAINQVVYRI 245

Query: 245 CLFYLVSIFLVVALVPWNDPALAETGS---------YQTVLSRIGVPNAKLIVDIVVLIA 295
            +FY+ ++ ++++L PW D  L   G+         +  + S IG   A  I++ VVL A
Sbjct: 246 LIFYVGALTVLLSLYPW-DQLLQTLGASGDAYSGSPFVQIFSLIGNDTAAHILNFVVLTA 304

Query: 296 VTSCLNSALYTSSRMLFSLSKRGDAPAIAQRTTKAATPHVAVLLSTAAAFLCVFANFVAP 355
             S  NS +Y +SRMLF L+++GDAP    +  K   P  A+ +S     LCV  N+VAP
Sbjct: 305 ALSVYNSGVYCNSRMLFGLAEQGDAPKSLMKLNKQGVPIRALAISALVTMLCVVVNYVAP 364

Query: 356 AQVFEFLLASSGAIALLVYLVIAVSQLRMRAQREARGEKITFKMWLFPGLTWATIAFIVA 415
               E L A   A  ++ + +I+++ ++ R     +G   +FK + FP   +  +AF+V 
Sbjct: 365 QSALELLFALVVASLMINWALISITHIKFRKAMGEQGVTPSFKTFWFPFSNYLCLAFMVM 424

Query: 416 ILVVM 420
           I+ VM
Sbjct: 425 IISVM 429