Pairwise Alignments

Query, 461 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 460 a.a., putative Gamma-aminobutyrate transporter from Pseudomonas putida KT2440

 Score =  324 bits (831), Expect = 3e-93
 Identities = 174/450 (38%), Positives = 274/450 (60%), Gaps = 3/450 (0%)

Query: 6   SNDLAQGLKQRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRMLG 65
           S+ L Q LKQRH+TM+++ GVIGAGLF+GSG  IA+AGPA +L+Y   G +V LVM MLG
Sbjct: 3   SHGLKQSLKQRHITMIALGGVIGAGLFMGSGSLIASAGPAAILSYFIGGLVVTLVMFMLG 62

Query: 66  EMAVASPDTGSFSTYADRAIGRWAGFTIGWLYWWFWVLVIPLEANAAAAILHAWFPAVDL 125
           EMA  +PD GSFSTYA+  +G WAGF +GWLYW+  ++ I LEA    AILH + P + +
Sbjct: 63  EMACRNPDAGSFSTYANTYLGDWAGFAVGWLYWFKSMMTITLEAVLLGAILHDFLPWLPI 122

Query: 126 WAFSLIITLALTLTNLCSVKNYGEFEFWFALLKVLAIIGFIAVGCAALFGFVPSSQVSGT 185
           WA + ++ + L  +N  SV+++ E E+W A +KV  I+ F+ +G + L G        G 
Sbjct: 123 WAGAFLMLVTLMASNAYSVRSFAEVEYWLAAMKVATILIFMLLGVSILLGLHSDIPAPGL 182

Query: 186 SHLFDTQGFMPNGLGAVLAAMLTTMFSFMGTEIVTIAAAESKDPGKQISRATNSVIWRIC 245
            +L    GFMPNGL  V+A ++  +FS  G+EI  +AA ES++P + + RA  SVI R+ 
Sbjct: 183 INLTAHDGFMPNGLSPVMAGVIVVIFSLGGSEIAAVAAGESENPRQNVIRAIKSVILRVM 242

Query: 246 LFYLVSIFLVVALVPWNDPALAETGSYQTVLSRIGVPNAKLIVDIVVLIAVTSCLNSALY 305
           LFY+ S+ +++  +PW D A      Y ++ S  G   A + + +V+ ++  S +NS ++
Sbjct: 243 LFYVGSVSILILCLPWTDKANL-ASPYVSLFSLAGFGGAAVAMKLVLFVSFMSVMNSFMF 301

Query: 306 TSSRMLFSLSKRGDAPAIAQRTTKAATPHVAVLLSTAAAFLCVFANFVAPAQVFEFLLAS 365
           ++SRMLFSLS+RG AP +  RT+    P  A+LLS +   + +  +FV+   +F  L  S
Sbjct: 302 SNSRMLFSLSQRGHAPKLFSRTSAKGVPINALLLSLSICTMILTVHFVSGGDLFMTLAKS 361

Query: 366 SGAIALLVYLVIAVSQLRMRAQ-REARGEKITFKMWLFPGLTWATIAFIVAILVVMALRE 424
           +G++ ++V++ I ++ + MR + R        F+ WLFP      +  ++A++   A   
Sbjct: 362 TGSLVMVVWIFIIIAHVAMRIKTRHEAVAPNAFRAWLFPYTNIIALFALLAVIGTQAFDP 421

Query: 425 DHRAEIIATALLSIGVVAAGLLVHRKREAA 454
             R +   T +L++ +V AG  + R+R A+
Sbjct: 422 ASRFQFWFT-VLTVLLVVAGYFLMRQRLAS 450