Pairwise Alignments

Query, 461 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 470 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

 Score =  481 bits (1238), Expect = e-140
 Identities = 257/460 (55%), Positives = 330/460 (71%), Gaps = 11/460 (2%)

Query: 2   SGNNSNDLAQGLKQRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVM 61
           SG+ S  L+  LK RH+TM+SIAGVIG  LFVGSG  I +AGPA +LAY A G LVVL+M
Sbjct: 12  SGHESK-LSASLKSRHLTMMSIAGVIGGALFVGSGSVIHSAGPAAVLAYLAGGILVVLIM 70

Query: 62  RMLGEMAVASPDTGSFSTYADRAIGRWAGFTIGWLYWWFWVLVIPLEANAAAAILHAWFP 121
           RMLGEMA +SPDTGSFSTYADRAIGRWAGFTIGWLYWW+WV+++  EA  A  ILH +FP
Sbjct: 71  RMLGEMATSSPDTGSFSTYADRAIGRWAGFTIGWLYWWYWVILMAWEAYVAGKILHGFFP 130

Query: 122 AVDLWAFSLIITLALTLTNLCSVKNYGEFEFWFALLKVLAIIGFIAVGCAALFGFVPSSQ 181
            V +  F L  TL L   N  +VK+YGEFEFWFAL+KV+AI+ F+ V  AA+       +
Sbjct: 131 DVSVNVFVLATTLLLITVNFFNVKHYGEFEFWFALIKVIAIVCFLIVCTAAVMNIWQFGE 190

Query: 182 VSGTSHLFDTQGFMPNGLGAVLAAMLTTMFSFMGTEIVTIAAAESKDPGKQISRATNSVI 241
           V G SHL   +GFMPNG+  V+ A+L  MF+F+G EIVTIAA+E+KDP  QI +ATNSV+
Sbjct: 191 VRGISHL-TAEGFMPNGITTVIGALLGVMFAFLGAEIVTIAASEAKDPAAQIVKATNSVV 249

Query: 242 WRICLFYLVSIFLVVALVPWNDPALAET--GSYQTVLSRIGVPNAKLIVDIVVLIAVTSC 299
           WR+CLFY+ SIFL+V LVPWNDP L  +  G+Y+  L  +GVP A+L+++ VVL +V+SC
Sbjct: 250 WRVCLFYVGSIFLIVCLVPWNDPHLGVSGYGAYRRTLELLGVPYAELLMNFVVLTSVSSC 309

Query: 300 LNSALYTSSRMLFSLSKRGDAPAIAQRTTKAAT--PHVAVLLSTAAAFLCVFANF---VA 354
           L S  YT+SRMLFSL++RGDAP+   + T+A T  P  A++ S A A +C   NF   + 
Sbjct: 310 LISGHYTASRMLFSLAQRGDAPSFF-KITRAGTGVPVYAIMGSCAVAVVCALINFSETLR 368

Query: 355 PAQVFEFLLASSGAIALLVYLVIAVSQLRMRAQREARGEKITFKMWLFPGLTWATIAFIV 414
           P  V + L+ ++G IALLVYLVIA SQLRMR +  A G+++  KMWLFP LT+  IAFIV
Sbjct: 369 PKDVLDTLMNTTGMIALLVYLVIAFSQLRMRRKLIAEGKEVRLKMWLFPWLTYLVIAFIV 428

Query: 415 AILVVMALREDHRAEIIATALLSIGVVAAGLLVHRKREAA 454
           A LV MA   D++  +I+T + +  VVA G +VH+ R  +
Sbjct: 429 AALVTMAFMPDYQILVISTGIAAAVVVAMG-VVHQIRSGS 467