Pairwise Alignments

Query, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  197 bits (502), Expect = 1e-55
 Identities = 107/252 (42%), Positives = 153/252 (60%), Gaps = 7/252 (2%)

Query: 5   KKFLLAAAATLVMSANAMAAEK-LRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMK 63
           +  +   A  L+ S++AMAAEK LR+GIEAAYPPF +K   G +VGFD DIG+ALCA+MK
Sbjct: 4   RSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCAQMK 63

Query: 64  VECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDF 123
           V+C  V  ++DG+IP+L  KK D  +SS++I ++RK++VDFT+ YY    + +  +    
Sbjct: 64  VKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGAVV 123

Query: 124 KTDKESLKGKVIGTQRATLAGTYLEDNY--PDVEIKLYDTQENAYLDLVSGRIDGILADK 181
                SLKGK IG QRAT    Y  + +    + +K Y   E  Y+DL +GR+D I AD 
Sbjct: 124 DDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIFADT 183

Query: 182 YVQYEWLKSKDGSNFEFKGEPVMD----SDKIGIAVRKGDTKLRDDLNKALAEIKADGTY 237
               ++L+   G  + F G  + D     +  GIAVRKG+T+L   LN A+  I+A G Y
Sbjct: 184 IPLNDFLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRASGEY 243

Query: 238 KKINDKYFPFSI 249
           +KI+ +YF   I
Sbjct: 244 QKISQQYFKSDI 255