Pairwise Alignments

Query, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

Subject, 246 a.a., arginine ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  184 bits (468), Expect = 1e-51
 Identities = 103/247 (41%), Positives = 145/247 (58%), Gaps = 9/247 (3%)

Query: 5   KKFLLAAA-ATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMK 63
           KK +LAA  A+  M+ NA AA+ +R    A YPPF + DA   +VGFD D+ +ALC +++
Sbjct: 2   KKLILAALLASATMTFNATAADTIRFAASATYPPFESLDAGNQIVGFDIDLANALCKQLQ 61

Query: 64  VECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDF 123
             CS     +D +IPAL  +++D ++S + IT ER + V FT PYY+N    IA K    
Sbjct: 62  ATCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVAFTQPYYANSAIVIAQKGKFH 121

Query: 124 KTDKESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYV 183
                 LKGK IG +  T    +L+D +P+V+   YD+ +NA +DL +GR+DG+  D  V
Sbjct: 122 SL--ADLKGKRIGMENGTTHQKFLQDTHPEVKTVPYDSYQNALIDLKNGRLDGVFGDTAV 179

Query: 184 QYEWLKSKDGSNFEFKGEPVMD----SDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKK 239
             EWLK+    +    GE V D       +GIAVR  +  L + LN AL  IKA+GTYK 
Sbjct: 180 VNEWLKT--NPDLATVGEKVTDPAYFGIGLGIAVRPDNQPLLEKLNGALNAIKANGTYKA 237

Query: 240 INDKYFP 246
           +NDK+FP
Sbjct: 238 LNDKWFP 244