Pairwise Alignments

Query, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

Subject, 256 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  170 bits (431), Expect = 2e-47
 Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 9/249 (3%)

Query: 8   LLAAAATLVMSANAMAAEKLRMGI-EAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEC 66
           LLA  A  V +  A A   +R GI   +YPPF  KDASG   G++ D+ DA+CA+MK +C
Sbjct: 7   LLAGTAFAVSAFTASA--DVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKC 64

Query: 67  SVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFKTD 126
           S+V   WDG+IPAL  KKFD + SS+S T ER++ +DFTN YY+   + I  K       
Sbjct: 65  SIVELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAA 124

Query: 127 KESLKGKVIGTQRATLAGTYLEDNYPDV-EIKLYDTQENAYLDLVSGRIDGILADKYVQY 185
            E +KGK IG Q AT+   Y +  +  V + K Y T + A+ DL +GRID +  D  V  
Sbjct: 125 PEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDSLVLD 184

Query: 186 EWLKSKDGSN-FEFKGEPVMDSDKIGIAV----RKGDTKLRDDLNKALAEIKADGTYKKI 240
            ++KS  G +     G    D + +G+ V    RK DT+L++ LN A+A ++A G Y +I
Sbjct: 185 AFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGKYDEI 244

Query: 241 NDKYFPFSI 249
             KYF F I
Sbjct: 245 TKKYFSFDI 253