Pairwise Alignments

Query, 230 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 262 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  128 bits (321), Expect = 1e-34
 Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 9/207 (4%)

Query: 15  GTLMTVKLALCALLLGLVLGLLGALAKTSPFKPLQWLGGFYSTLVRGVPELLWVLLIYFG 74
           GT  TV+L L + L G++ G+L AL K S FKP +WL  FY  ++RG P L+ +L ++  
Sbjct: 57  GTRTTVRLTLVSGLAGILFGVLAALGKLSAFKPARWLASFYIWVIRGTPLLVQILFVFLA 116

Query: 75  TVGLMNSLGEALNMPGLELSAFAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALG 134
              L+         P L+L  F +  +AL    GAY  E  R  +LA+P+G  EA  +LG
Sbjct: 117 LPVLI---------PALQLDDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEASRSLG 167

Query: 135 LSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPF 194
           LS+G     ++LPQ ++++LP L N F+ L+KD++L   IG+ E+          T +P 
Sbjct: 168 LSRGYTFFDVVLPQAFKVSLPPLVNNFISLLKDSSLAYAIGVVELTNVGNRMQAATFQPL 227

Query: 195 TFYMVAACIYLGLTVLAMTGMHFMEKR 221
                 A IYL LT       + +E R
Sbjct: 228 PALATIAVIYLLLTTALTQISNAVENR 254