Pairwise Alignments

Query, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  198 bits (503), Expect = 9e-56
 Identities = 97/222 (43%), Positives = 152/222 (68%), Gaps = 1/222 (0%)

Query: 1   MNWEVIFKWLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFF 60
           M+ ++I +  P+L      TL L  I+++ G ++++P+ + R S++  V ++ + Y++  
Sbjct: 1   MDIQLIIESFPKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYII 60

Query: 61  RGTPLLVQLFLVYYGLAQFDAVRSS-SLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQ 119
           R TPLLVQ+FL+YYG AQF  V S   LW   R+P++C +L + L+TAAY +EI+RG +Q
Sbjct: 61  RSTPLLVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQ 120

Query: 120 AIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179
           ++  G+IEAARA+GMS       I+ P A R  LPAY NEV+L++K+++LAST+T++E+T
Sbjct: 121 SVSLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVT 180

Query: 180 GMARTIIARTYLPVEIFFAAGVFYLVISFMLVQGFKLLERWL 221
           G+A+ II+ TY PVE+F  AG  YL I+F++ +   L E WL
Sbjct: 181 GLAKQIISATYSPVEVFIVAGAIYLFITFVVSRLVMLAEWWL 222