Pairwise Alignments

Query, 765 a.a., Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  156 bits (395), Expect = 4e-42
 Identities = 185/766 (24%), Positives = 317/766 (41%), Gaps = 85/766 (11%)

Query: 35  AVAADGKPLELDATQIEDSAVLPADDAGQLGYTVESTRSSTGLALTPRQTPQSVTTITRQ 94
           ++  +G  +EL AT I  +    +      GY    + S T       +TPQS++ +T+ 
Sbjct: 112 SIPDNGGAMELQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKD 171

Query: 95  QMDDRDIHTIEQALE-TAPGVTANKSEVGGRTDYRA-RGYSISNWKVDGLQTQGGSDFSG 152
           QM  ++  ++ Q L  +A  +   +     R D    RG+S + + +DGL+     D   
Sbjct: 172 QMRAQNAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPATY-LDGLRMPSSRDALP 230

Query: 153 SGNALNMDLYERIDIVRGANGLLGGTGDPSATVNLIRKAPTKTFGGSAYATYGSWDKRRL 212
             +A ++   ER++++RG   +L G G PS  +N++ K P  T        YG+++K+R 
Sbjct: 231 QKDAFDL---ERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRT 287

Query: 213 GADLNLPLSEDGRLRSRFVMTQQDANSFRDNQSERSRAALANFEFDLDDATTLGAGYQYE 272
             DL+ P+ + G    R      DA+   ++   R ++  + F +  DDAT+L     ++
Sbjct: 288 TFDLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQ 347

Query: 273 YNKVVGGGWGANIPIWYRDGSKTDLPRSTNLVPSWSFGE----------YTTRTAFGSLE 322
            +   G  +G ++P W   GS    P   ++   +  GE          Y+   AF   E
Sbjct: 348 KDP-KGASYG-SVPAW---GSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAF---E 399

Query: 323 HRFDNDWTLDLKAAQATTEALNHRGLAKVNSAGRGSYGGYWDQDGSGAVLNGLHSSSDTT 382
           H FD+ WT+   A    +E   +R L          Y  Y   D      + + S  D  
Sbjct: 400 HHFDDVWTVRQNARYLRSEG-QYRSL----------YSNYLMADYRTIRRSTIASDVDLD 448

Query: 383 QQSAQIDLSGPFQLFGRTHQAMVGYNDSRTVGWSPQYTCTMVGDGMTSAPALGCQFRANN 442
             +    +   F      H  ++G +   T       T T+ G G+ +A           
Sbjct: 449 AYTLDNQVQAKFDTGPLQHTLLMGLDYQNT------STDTLSGSGVYTAG---------- 492

Query: 443 GFPVTDWHNGVDDDYDLIASRTGLHSKTTTRLQ--GMYAATRLSITDPLSVIVGVR---- 496
             P  D  N V   Y          +  T+R +  G+Y   ++   D   +++G R    
Sbjct: 493 --PTLDIFNPV---YGAAVPVPAYTTDGTSRSEQTGVYLQEQMK-WDKWVLLLGGRYDWA 546

Query: 497 TSNYSSVTRSVAGERSSQEENGIVTPYLGAVYDLNVNYSVYASYTDIFTPQTSETSSGSK 556
           +++ S+ T S   +  S  ++   T  +G VY  +   + YASY + F PQ+     GS 
Sbjct: 547 STDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYGGSV 606

Query: 557 VEPIRGQSYETGIKGEWFDGRLNASAAYFRTKQENKAVLDGDLTTPTGGSAYKAGSGQ-E 615
            +P  G+ YE GIK +        +AA F  +Q N    D D T   G    ++  G+ +
Sbjct: 607 FKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDGEVQ 666

Query: 616 TDGIDLEVAGALTPNWNVYAGYTYLHFRRVDSDGR------SD----PSHLFKASTTYRL 665
           + G +LE   +L  N ++ A Y YL  R   S+        SD    P+   + +TTY +
Sbjct: 667 SRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYGV 726

Query: 666 SGPLDRLTLGAGVTAQT-NIRAISSPAGQPTNGVSNG--ATDVNWSGYAIWNAMAKY--- 719
             P    +  A  T     ++     AG    G S G  A  +   GY +++A   Y   
Sbjct: 727 --PRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVPGYTLFDAAVHYDIP 784

Query: 720 ---QLTDDTSVSLHANNLFDKHYYSQYGFYAGAIYGDPRNLSLTVS 762
              +L D+  ++L+A NL +K Y +    Y+   YG  R +  + +
Sbjct: 785 NIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASAT 830