Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  196 bits (497), Expect = 5e-55
 Identities = 118/232 (50%), Positives = 151/232 (65%), Gaps = 11/232 (4%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           +LVVDDD EIR+LL  YL   G+ V AA DG++M ++L   +++ VVLDLMLP   GL L
Sbjct: 8   ILVVDDDLEIRKLLSRYLAAQGFRVTAAGDGREMDEKLTTQRIDFVVLDLMLPDASGLDL 67

Query: 65  CRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRLG 124
           CR L+A   + VI+L+A    +DRIIGLE+GADDYL KPF PREL+ARI+AVLRR     
Sbjct: 68  CRALRARSRVPVILLTALKEDVDRIIGLEIGADDYLGKPFNPRELVARIRAVLRR----- 122

Query: 125 TSAEEP---MVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181
           TS  +P    V A  FAGFR E   R +T  DG  + L  +++ +L   LE   R++SRD
Sbjct: 123 TSVTDPTSSAVRAYGFAGFRAEPDLRRVTAADGSEVPLTGAEFDLLMAFLERPGRILSRD 182

Query: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQIL-TIRNEGYLLSL 232
           QL     GR+  P DRSVD+ VSRLR++L     G  QIL T+RN GY LS+
Sbjct: 183 QLLDITRGREAGPFDRSVDVLVSRLRRKL--GDQGAFQILKTLRNGGYQLSV 232