Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 242 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  159 bits (403), Expect = 4e-44
 Identities = 89/243 (36%), Positives = 145/243 (59%), Gaps = 6/243 (2%)

Query: 1   MSTT--LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPG 58
           M TT  ++V+DD+ +I +LL +YL   G+ V    DG+ +   +     +LV+LDL LPG
Sbjct: 1   MKTTPHIVVLDDEIDITQLLANYLHGHGFRVTQVHDGRALMALMETDPADLVLLDLGLPG 60

Query: 59  EDGLSLCRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLR 118
           EDG S+ R+++      +++++ +G  +D+++GLEVGADDY+ KPF+ REL+AR+KAVLR
Sbjct: 61  EDGFSIARRMRERWHCGLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLR 120

Query: 119 R---PQRLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANN 175
           R      +  ++     D   FAG++L+   R L  P GE +TL   ++ +L+       
Sbjct: 121 RLAPATPVPPASAGAFADRLRFAGWQLDTAARSLLNPSGEPVTLTGGEFDLLQAFARHPG 180

Query: 176 RVVSRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPL 235
           RV+SRD L     GR+  P DR++D+ V RLR+++         I ++R  GY+L + P+
Sbjct: 181 RVLSRDFLLEQTRGREAAPFDRTIDVQVGRLRKKIEADAEDPQLIKSVRGAGYIL-VPPV 239

Query: 236 AAG 238
           + G
Sbjct: 240 SNG 242