Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 1e-44
 Identities = 98/229 (42%), Positives = 135/229 (58%), Gaps = 8/229 (3%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           LL++DDD E+ ELL  +LT  G++V A  DGQ  R  LA H    VVLD+MLP   GL L
Sbjct: 4   LLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSGLEL 63

Query: 65  CRQLQATPG-LAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRL 123
            +QL++    L V+MLSA+G  LDRI+GLE+GADDYLAKP +PREL AR++AVLRR    
Sbjct: 64  LKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRSHPT 123

Query: 124 GTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRDQL 183
            T+       +Q+  G  +    R +   DG  +TL  S+ R+L  LL      + + +L
Sbjct: 124 ATT-------SQMELGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQEL 176

Query: 184 TRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSL 232
            +   GR     DRS+DM VS LR+++     G  +I+ +R+ GY   L
Sbjct: 177 AQIGLGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGYYYCL 225