Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., Chemotaxis protein CheY from Pseudomonas putida KT2440

 Score =  182 bits (463), Expect = 4e-51
 Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 9/234 (3%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           +L+VDDD EIREL+ +YL   G      ADG+QMR  L  + V+L+VLD+M+PG+DGL L
Sbjct: 7   ILIVDDDREIRELVGNYLKKNGLRTSIVADGRQMRAFLEANSVDLIVLDIMMPGDDGLLL 66

Query: 65  CRQLQATP--GLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRR--- 119
           CR+L+A       V+ML+A+    DRIIGLE+GADDYL KPF  REL+ARI AVLRR   
Sbjct: 67  CRELRAGKHRNTPVLMLTARNDETDRIIGLEMGADDYLTKPFSARELLARINAVLRRTRM 126

Query: 120 -PQRLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVV 178
            P  L  S    ++    F  +RL+   R L   +G  + L  ++YR+LR  L+   RV+
Sbjct: 127 LPPNLTISESSRLLG---FGQWRLDTTARHLLDSEGTLVALSGAEYRLLRVFLDHPQRVL 183

Query: 179 SRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSL 232
           SR+QL     GR+    DRS+D+ VSRLRQ+L       + I T+R+EGY+ SL
Sbjct: 184 SREQLLNLTQGREADIFDRSIDLLVSRLRQRLGDDAREPSCIKTVRSEGYVFSL 237