Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 244 a.a., response regulator transcription factor from Pseudomonas fluorescens SBW25

 Score =  181 bits (460), Expect = 9e-51
 Identities = 106/239 (44%), Positives = 145/239 (60%), Gaps = 5/239 (2%)

Query: 1   MSTTLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGED 60
           +S ++L+VDDD EIRELL  YL+ AG+ V    DG   R  +     +LV+LD+MLP ED
Sbjct: 4   ISKSILLVDDDQEIRELLQTYLSRAGFQVRGVPDGAGFRQAMNEAPCDLVILDVMLPDED 63

Query: 61  GLSLCRQLQATPGLA---VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVL 117
           G SLCR ++  P  A   +IML+A     DR+IGLE+GADDY+ KPF PREL ARIKA+L
Sbjct: 64  GFSLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALL 123

Query: 118 RRPQRLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRV 177
           RR Q  G        D  +F  +RL+ +   L   DGE + L  +D+ +L+  L+   ++
Sbjct: 124 RRCQ-FGQERSSG-GDVLVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQI 181

Query: 178 VSRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPLA 236
           + RD +  +  GRD +P DR VDM VSRLRQ+LR        I T+R  GY L+ + +A
Sbjct: 182 LDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASVVA 240