Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 454 a.a., porin from Pseudomonas simiae WCS417

 Score =  210 bits (534), Expect = 8e-59
 Identities = 153/465 (32%), Positives = 221/465 (47%), Gaps = 48/465 (10%)

Query: 7   SLVALAMIAATQAQANDQADSKGFIEDSHANVLLRNAYINRDKKHGT--DDQIEWGQAFI 64
           S +ALA+     AQ   QA + GF+EDS A + LRN YIN D ++GT  +   EWGQ F 
Sbjct: 4   STLALAVALGAIAQ---QAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFD 60

Query: 65  ANFSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETTN----AEGNASSP 120
             F SG+TQGTVG GVDA GL  VRLD G G NG        P         +E N  + 
Sbjct: 61  LRFISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAV 120

Query: 121 HNLARGGAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSKEIQGLELNA 180
           ++ +  G   K +IS T LK G   P LPV+  +D RLLP++F G  IT+ +I+ L L  
Sbjct: 121 NDYSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVG 180

Query: 181 GRFTQEARKSAERRDGGGLKSIN-------------VLGGSYKFTDNFTASLYTADNEDV 227
           G+  +   +++   +   L   N               GG YK T + TA  Y  + ED 
Sbjct: 181 GQIEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDF 240

Query: 228 MKKHYLGLNYVFPI-------------ASDQSLTLDFNGYKSDINNKYVKAAGLNGDSNT 274
            K+H+LGL + + I             +SD     + + Y +  N +  + AG     N 
Sbjct: 241 YKQHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFR-AGKGKVDNN 299

Query: 275 IWSLAATYAYGAHSFTLAHQRSTGSTGYNYGFYQNAGGVGDGGSTIYLANSYWSDFNAED 334
           ++S    Y    H+F   +Q S GS+ + +         GDG S     +     F    
Sbjct: 300 LYSGLFLYTVAGHTFGGGYQVSNGSSDFPW------LNQGDGSSAYLTTDMQIQKFARAG 353

Query: 335 ERSWQLGYGLDFGAYGIPGLTYKLAYVVGDNINT-RNVANPQGFGEGKEREIFNQIRYVV 393
           ER+WQ  Y  DF   G+PGLT  + Y+ G +I+T  N A+   F    E E    + YV+
Sbjct: 354 ERTWQARYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVI 413

Query: 394 QDGPAKDLSIKLRSSFLRTNNAVQQNGYNDDGNEVRVFVEYPISI 438
            +GP K+L +  +++  RT+ A  +     D +E R+ V Y I +
Sbjct: 414 PEGPLKNLGVAWKNAMWRTDIAGAR-----DQDENRLIVSYSIPL 453