Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  205 bits (521), Expect = 2e-57
 Identities = 149/457 (32%), Positives = 231/457 (50%), Gaps = 70/457 (15%)

Query: 1   MLKTRISLVALAMIAATQAQANDQADSKGFIEDSHANVLLRNAYINRDKKHGTDDQ---I 57
           +L T ++ +AL ++A          +  GF+ED+ AN+ LRN + NR+  + T  Q    
Sbjct: 10  LLATAVASLALPVVA----------EEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQ 59

Query: 58  EWGQAFIANFSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETTNAEGNA 117
           EW Q+FI +  SGFTQGTVG GVD  GLY+++LDGG+G  G          +    + + 
Sbjct: 60  EWTQSFILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGT---------QLLPLDHDG 110

Query: 118 SSPHNLARGGAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSKEIQGLE 177
                  R G A K RIS T +K G+ MP LP+L+ DD R LP++  G  ITSKEI GL 
Sbjct: 111 RPADEFGRLGVAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLT 170

Query: 178 LNAGRFTQEARKSAERRDGGGLKSI-------------NVLGGSYKFTDNFT-ASLYTAD 223
           L  G+F     ++   RD   +  +             N  G  Y F D  T   L+ A 
Sbjct: 171 LYGGQF-----RANSPRDDSSMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQ 225

Query: 224 NEDVMKKHYLGLNYVFPIASDQSLTLDFN-GYKSDINNKYVKAAGLNGDSNTIWSLAATY 282
            +D+  + ++ L +  P+    + TL  N G+    ++   +A  L+   N  WS   + 
Sbjct: 226 LKDIYSQQFINLIHSQPLG---NWTLGANLGFFYGKDDGSARAGELD---NKTWSGLFSA 279

Query: 283 AYGAHSFTLAHQRSTGSTGYNYGFYQNAGGVGDGGSTIYLAN-SYWSDFNAEDERSWQLG 341
            YG ++F L  Q+ TG++      +    G   G     LAN SY + ++   E+SWQ+ 
Sbjct: 280 KYGGNTFYLGLQKLTGNSA-----WMRVNGTSGG----TLANDSYNASYDNAQEKSWQVR 330

Query: 342 YGLDFGAYGIPGLTYKLAYVVGDNINTRNVANPQGFGEGKEREIFNQIRYVVQDGPAKDL 401
           +  +F A G+PGLT    Y+ G N++T  V       +GKE    +++ Y VQ G  K+L
Sbjct: 331 HDYNFAALGVPGLTLMNRYISGSNVHTGTVT------DGKEWGRESELGYTVQSGSLKNL 384

Query: 402 SIKLRSSFLRTNNAVQQNGYNDDGNEVRVFVEYPISI 438
           +++LR+S +R + +      N++ +E R+ V YPIS+
Sbjct: 385 TVRLRNSSMRRDYS------NNEFDENRLIVSYPISL 415