Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 2e-62
 Identities = 154/441 (34%), Positives = 215/441 (48%), Gaps = 54/441 (12%)

Query: 21  ANDQADSKGFIEDSHANVLLRNAYINRD-------KKHGTDDQIEWGQAFIANFSSGFTQ 73
           A   A + GF+ED+ A +  RN Y NRD          G   + EW Q FI N  SG+TQ
Sbjct: 25  AGVNAQAAGFLEDASAKIEARNVYFNRDFRDGYSSSSQGASKREEWAQGFILNVQSGYTQ 84

Query: 74  GTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETTNAEGNASSPHNLARGGAAVKFR 133
           G VGVGVDA G++  +LD     +  G +        ++      S    A+ G A K +
Sbjct: 85  GPVGVGVDALGMFGFKLDSSPADSNSGLLP-------SSGHDPRRSADQYAKMGLAAKVK 137

Query: 134 ISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSKEIQGLELNAGRFTQ-EARKSAE 192
           +SNTVLKYG  MP +P+L+Y+D RLLP  F G ++TS+E+  L+    R  +  AR S +
Sbjct: 138 VSNTVLKYGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHDLKFTLARLDKYTARDSTD 197

Query: 193 RRD------------GGGLKSINVLGGSYKFTDNFTASLYTADNEDVMKKHYLGLNYVFP 240
           R+D                   ++ G  Y+F + F+A    A  E++ ++H+LGL    P
Sbjct: 198 RQDIRVHCKNKRYACDTEADHFDLAGVDYRFNERFSAQYQVAKLENIYRQHFLGLVASQP 257

Query: 241 IASDQSLTLDFNGYKS-DINNKYVKAAGLNGDSNTIWSLAATYAYGAHSFTLAHQRSTGS 299
           +    SL+ D    KS DI N     A      +  +S    Y+ G H  +   QR  G+
Sbjct: 258 LPVG-SLSADMRLIKSDDIGN-----ARAGEIDHRAFSGMLGYSLGGHKLSAGWQRMYGN 311

Query: 300 TGYNYGFYQNAGGVGDGGSTIYLAN-SYWSDFNAEDERSWQLGYGLDFGAYGIPGLTYKL 358
           +   Y            GS  YL N +  +DF A  ERSWQ+ Y  DF A G+PGLT+  
Sbjct: 312 SAMPY----------LDGSNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFT 361

Query: 359 AYVVGDNINTRNVANPQGFGEGKEREIFNQIRYVVQDGPAKDLSIKLRSSFLRTNNAVQQ 418
            Y+ GDNI       P    EGKE E   + +Y VQ G  KD+S++LR+S  R+N     
Sbjct: 362 RYINGDNIKV-----PGSSVEGKEWERDTEFKYQVQSGTFKDVSVRLRNSTYRSN----Y 412

Query: 419 NGYNDDGNEVRVFVEYPISIF 439
             +  D +E RV V Y  SIF
Sbjct: 413 ERWARDMDETRVIVSYNFSIF 433