Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  236 bits (601), Expect = 1e-66
 Identities = 165/467 (35%), Positives = 239/467 (51%), Gaps = 60/467 (12%)

Query: 4   TRISLVALAMIAATQAQANDQADSKGFIEDSHANVLLRNAYINRDKK------HGTDDQI 57
           T  + +ALA + +    A   AD  GF+E S  +VL RN Y NRD +      H    Q 
Sbjct: 8   TLAACLALAGVGSQVVAAEKSAD--GFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQA 65

Query: 58  E------WGQAFIANFSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETT 111
           +      WG A I  F SGFTQGTVGVG+DAF +  ++LD G G NGG       P    
Sbjct: 66  DNGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLP---V 122

Query: 112 NAEGNASSPHNLARGGAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSK 171
           + +G A   +   + G A K R+ +TVLK GD  PA PV+   D+RLLPESF G  + + 
Sbjct: 123 DRDGQARDEY--TKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENS 180

Query: 172 EIQGLELNAGR-------FTQEARKSAERRDGGGLKS--INVLGGSYKFTDNFTASLYTA 222
            I+ L L AGR        + + R++     GG + S  I   GG Y+  ++ + SL+++
Sbjct: 181 SIKDLTLQAGRLHAMSQPMSSDLRENFVTFYGGPVDSPWIAYGGGDYRLNEHVSVSLFSS 240

Query: 223 DNEDVMKKHYLGLNYVFPIASDQSLTLDFNGYKSDINNKYVKAAGLNGDSNTIWSLAATY 282
             +D   ++Y G +  +P++   +L   FN YK+    +      L    N IWS     
Sbjct: 241 RLKDAWNQYYAGTSLSWPLSEALALIGGFNYYKAVDEGQ----QRLGAFDNDIWSAKLGV 296

Query: 283 AYGAHSFTLAHQRSTGSTGYNYGFYQNAGGVGDGGSTIYLANS-YWSDFNAEDERSWQLG 341
            +GAH+  L HQR+ G   ++Y   Q+         +I+L NS  +SDFNA  ERSW L 
Sbjct: 297 RFGAHTLALTHQRNNGDDDFDY-LRQS--------DSIFLDNSIQYSDFNAPKERSWMLR 347

Query: 342 YGLDFGAYGIPGLTYKLAYVVGDNINTRN----------VANPQGFGEGKEREIFNQIRY 391
           Y L+  AYG+PGL++   Y  G++ +  N            NP    +  ER+I  +++Y
Sbjct: 348 YDLNMAAYGVPGLSFMTRYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDI--EVKY 405

Query: 392 VVQDGPAKDLSIKLRSSFLRTNNAVQQNGYNDDGNEVRVFVEYPISI 438
           VVQ G AKDLS+++R +  R         +  D +EVR+ VEYP+SI
Sbjct: 406 VVQTGAAKDLSLRVRQATTRA------TAFESDLDEVRMIVEYPLSI 446