Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  234 bits (597), Expect = 4e-66
 Identities = 159/454 (35%), Positives = 237/454 (52%), Gaps = 44/454 (9%)

Query: 9   VALAMIAATQAQAN-DQADSKGFIEDSHANVLLRNAYINRDKKH-GTDDQIEWGQAFIAN 66
           +AL       AQA+ D+AD  GFIE S  N+  RNAY NRD  + G  D  EWGQ  +A 
Sbjct: 12  IALTATIPFAAQADEDKAD--GFIEGSSFNLHFRNAYFNRDNHNAGVRDTREWGQGAVAR 69

Query: 67  FSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETTNAEGNASSPHNLARG 126
           F SG+T G VG G+DA  +  ++LDGG GH    G      H   + E  A +PH+ +  
Sbjct: 70  FESGYTPGVVGFGLDAHAMLGLKLDGGGGH---AGTSILPEHIKDDGELGA-APHSFSTA 125

Query: 127 GAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSKEIQGLELNAGR--FT 184
           GAAVK +  +T LK GD     PV+   + R+LP++F G  +T+  I GL L  G+  FT
Sbjct: 126 GAAVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFT 185

Query: 185 QEARKSAERR---------DGGGLKSINVLGGSYKFTDNFTASLYTADNEDVMKKHYLGL 235
               +S  RR         +    K +N  G S+  T++ TA+LY A+ +D+  ++Y   
Sbjct: 186 HPYNQSGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADF 245

Query: 236 NYVFPIASDQSLTLDFNGYKSDINNKYVKAAGLNGDSNTIWSLAATYAYGAHSFTLAHQR 295
           +Y + +    SL    + Y +    +    A L    N  +S+  T   G HS T A+QR
Sbjct: 246 DYTYVVNDLVSLNPGVHFYHTQDTGQ----ALLGKIDNNTYSVHFTVNAGFHSVTAAYQR 301

Query: 296 STGSTGYNYGFYQNAGGVGDGGSTIYLANS-YWSDFNAEDERSWQLGYGLDFGAYGIPGL 354
             G+T ++Y          + G ++YL NS  +SDFNA +ERSW+L YG DF   G+PGL
Sbjct: 302 VNGNTPFDY---------INLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGL 352

Query: 355 TYKLAYVVGDNINTRNVANPQGFG----EGK-----EREIFNQIRYVVQDGPAKDLSIKL 405
           +  L+Y  G+   T+   +   +     +GK     ER++   ++YV Q+G  KDLS+ +
Sbjct: 353 STSLSYSRGEADLTKATQDTTHYDYYREDGKNAMHWERDL--DVKYVFQEGDLKDLSVLV 410

Query: 406 RSSFLRTNNAVQQNGYNDDGNEVRVFVEYPISIF 439
           R +  R +        N D +E+RV V+YP+++F
Sbjct: 411 RYATHRGSQGYASIDSNSDNDELRVIVDYPLNVF 444