Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  254 bits (650), Expect = 3e-72
 Identities = 167/472 (35%), Positives = 238/472 (50%), Gaps = 63/472 (13%)

Query: 2   LKTRISLVALAMIA---ATQAQANDQADSKGFIEDSHANVLLRNAYINRDKKHGTDDQIE 58
           +K  + L A++ ++   A  AQA D+ +  GFIE S   VL RN Y NRD +  T     
Sbjct: 3   IKVPLYLAAVSALSGSYAISAQAEDKPE--GFIEGSSLTVLNRNFYFNRDNRDSTAPTYN 60

Query: 59  ------------WGQAFIANFSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFK 106
                       W  A I+ F+SGFTQGTVG GVDAF +  ++LD G G NGG       
Sbjct: 61  SGKGNTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGR-----S 115

Query: 107 PHETTNAEGNASSPHNLARGGAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGT 166
             +    +    +     + G A K R+ +T++K GD  P+ PV+   D+RLLPESF G 
Sbjct: 116 SFDVLPVDNKGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGV 175

Query: 167 LITSKEIQGLELNAGRFTQEARKSAERRD-------GGGLKS--INVLGGSYKFTDNFTA 217
            + +  IQGL L  GR    ++  +   +       GG + S  I   GG Y   DN+T 
Sbjct: 176 TVENTSIQGLTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWTV 235

Query: 218 SLYTADNEDVMKKHYLGLNYVFPIASDQSLTLDFNGYKSDINNKYVKAAGLNGDSNTIWS 277
           S+Y +  +DV  ++Y G + V+P++ D +L   FN YK+    K      L    N IWS
Sbjct: 236 SVYASQLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGK----KRLGEFDNNIWS 291

Query: 278 LAATYAYGAHSFTLAHQRSTGSTGYNYGFYQNAGGVGDGGSTIYLANS-YWSDFNAEDER 336
                 YGAH+  L+HQR+ G   ++Y   Q+         +I++ NS  +SDFN+  ER
Sbjct: 292 AKVGVRYGAHTLALSHQRNNGDDDFDY-LRQS--------DSIFVDNSIQYSDFNSPKER 342

Query: 337 SWQLGYGLDFGAYGIPGLTYKLAYVVGDNINTRNV----------ANPQGFGEGKEREIF 386
           SW L Y L+F +YGIPGLT+   Y  G   +  N            NP    +  ER++ 
Sbjct: 343 SWMLRYDLNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDV- 401

Query: 387 NQIRYVVQDGPAKDLSIKLRSSFLRTNNAVQQNGYNDDGNEVRVFVEYPISI 438
            +++YVVQ GPAKDLS +LR +  R         +  D +E RV +EYP+SI
Sbjct: 402 -EVKYVVQTGPAKDLSFRLRQATTRA------TAFESDLDETRVIIEYPLSI 446