Pairwise Alignments

Query, 604 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  337 bits (863), Expect = 1e-96
 Identities = 226/631 (35%), Positives = 338/631 (53%), Gaps = 55/631 (8%)

Query: 3   AKPTPPRRPRW-RSLALLALILAPLL-------WPLHHLAERYYQEELASQNRQTLDLYV 54
           A P+   +PR  R L L  LI+A ++       W    ++E Y    L+    + L+L+ 
Sbjct: 11  APPSLAVKPRLIRQLFLPPLIIALMIGLGYIGFW----VSEYYGIRTLSDTGERQLELHA 66

Query: 55  ANLLGTLHRYETLPQILGDLPALRGVLADPFRLEAVTNANRLLKDIVQKTGAEVMYLMDV 114
             +   L +Y  LP +L    ++  +LADP + E     N  L+ + +++ +  +Y+MD 
Sbjct: 67  RTVESELSKYTYLPSLLELESSVSALLADPNQ-ETRKTVNDYLEGLNRRSRSRAIYVMDT 125

Query: 115 SGNTLAASNWDKHDSFVGRNFAFRPYFNEAMAGHLGRFFGQGTTSAKRGYFFAAAVRDRE 174
           +G  LA SNW   DS+ G + +FR YF  A+ G  GRF+G G+T+ + GY+ A  + +  
Sbjct: 126 TGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHG 185

Query: 175 RIVGVLVVKVDLDHTETLWGRTPEQLLLTDHNGVVILTSRPDWRFRATRTLTDAERQAII 234
           +I+GV VVKV L+  E  W R   +  ++D NG++IL+S P  R +A R L+D  ++ + 
Sbjct: 186 KIIGVAVVKVRLEALEERWQRARLEAFVSDENGIIILSSDPARRLKAVRPLSDDVKERLA 245

Query: 235 -AIQPY--PTQAPQPL-------------------VLNPQ---AWITQTRDIKETGWQVS 269
            ++Q Y       +PL                   V+N +   +++ QTR + +T W  +
Sbjct: 246 HSLQYYWATLNELEPLARERLNEGTEKLTFPANSEVVNDEHEVSYLAQTRPLNDTPWNFT 305

Query: 270 ILAP-----RTLVDRSVQTVMAIGAGTLLVLMLLAGLVMQRRRHYIDRI---DFEARGRQ 321
           +L P     R  +++ +   +A G   L+  +L+A    +RR+    R+   +       
Sbjct: 306 LLTPLNDLRRAAINQGILVAVAFG---LVAFLLIAW--NERRKVIATRLAAREALQEANS 360

Query: 322 ELEKRVAERTADLEGLNTRLKNAVLERENAQQEAVRAQDELVQAGKLSVLGTMSASISHE 381
           +LE+R+AERTADL   N RLK  + ER  A++   RAQDELVQAGKL+ +G MS SI+HE
Sbjct: 361 QLERRIAERTADLRASNERLKGQIRERRQAEETLRRAQDELVQAGKLAAIGQMSTSIAHE 420

Query: 382 LNQPLAAIRSYAENAEILLDHQRTEDARGNLKLIGELTGRMASIIAHLRAFARRDRHAPE 441
           LNQPLAA+R+ + N    L+    + A  NLK I EL  RM  I A LR+FARR     E
Sbjct: 421 LNQPLAALRTLSGNTVRFLERGALDTASANLKTINELIDRMGRITASLRSFARRGDDQGE 480

Query: 442 SVALQPALDDALALLAKRRRAMAVELIRDLPEATLWVQAGETRLRQVLGNLLANALDALT 501
           + +L  A+D A  +L  R  ++ + L RD   A L  Q  +TRL Q+L NL+ NALDA+ 
Sbjct: 481 A-SLAKAVDAAFQVLGARLDSLPLTLHRDFSHAQL--QIDQTRLEQILVNLIGNALDAMQ 537

Query: 502 EKANPRRLWLSAEQRDDCVYLYIRDNGPGFSRQALEHAKEPFFTTKTRTQGLGLGLAICE 561
            +  P  LWL     D    L++RDNG G   +A +H  EPFFTTK   QGLGLGL +  
Sbjct: 538 AQPAP-ELWLEGSSADGKYRLHVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSA 596

Query: 562 SLMRALGGELLLANHPEGGAMLTLQLRVAAS 592
           SL  A GG L + +   GG    L L +A +
Sbjct: 597 SLAAATGGNLAVEHPASGGTAFVLCLPLAGA 627