Pairwise Alignments

Query, 604 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 724 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score =  168 bits (426), Expect = 6e-46
 Identities = 117/363 (32%), Positives = 180/363 (49%), Gaps = 42/363 (11%)

Query: 5   PTPPRRPR--------WRSLALLALILAPLLWPLHHLAERYYQEELASQNRQTLDLYVAN 56
           P PP RPR        W +    AL+L  L      + E  +Q   A   R+ ++++V  
Sbjct: 9   PVPPFRPRLRYRTVAAWTAACAFALLLIGLAGQWAAVREANFQ---ADSIRRAMEVHVLG 65

Query: 57  LLGTLHRYETLPQILGDLPALRGVLADPFRLEAVTNANRLLKDIVQKTGAEVMYLMDVSG 116
           L  +  +Y  LP   G  P +   LA P        AN  ++++ ++ G++ +YL D+ G
Sbjct: 66  LRDSAGKYSYLPFTTGLHPEVLAALAHPEDAAVKQRANLYIEEVNRQAGSDALYLSDLQG 125

Query: 117 NTLAASNWDKHDSFVGRNFAFRPYFNEAMAGHLGRFFGQGTTSAKRGYFFAAAVR-DRER 175
            TLAASNWD   SFVG ++A RPYF +A AG  G F+G G T+ + G F +A VR D   
Sbjct: 126 LTLAASNWDTPQSFVGESYANRPYFRDARAGRSGLFYGLGQTTGEPGLFISAPVRPDGGA 185

Query: 176 IVGVLVVKVDLDHTETLWGRTPEQLLLTDHNGVVILTSRPDWRFRATRTLTDAERQAIIA 235
           ++GV+ VKV L   +  W    + +LLTD  G+V L+S P W ++ATR L+  + + I  
Sbjct: 186 VLGVVTVKVSLRQLQEAWTFVRDPILLTDARGIVFLSSVPSWMYQATRALSPTDVEGIRR 245

Query: 236 IQPYPTQA---PQPLVL-----------------NPQAWITQTRDIKETGWQVSILAPRT 275
            Q Y  +    P P  L                  P+ ++     + + GW ++++A   
Sbjct: 246 DQQYGARTDFPPLPWQLERDDGQPGYLVRTSIGGKPRRFLAVDEPLPDLGWTLTVMADHA 305

Query: 276 LVDRSVQTVMAIGAGTLLV--LMLLAGLVMQ-RRRHYIDRIDFEARGRQELEKRVAERTA 332
            V R+ +    +G   LLV  ++LL GL  Q R R + ++ D     R++LE RV ERT 
Sbjct: 306 EVSRARERTWMLG---LLVAGVLLLGGLYWQLRERRFAEQRD----ARRDLELRVRERTH 358

Query: 333 DLE 335
            L+
Sbjct: 359 ALD 361



 Score =  119 bits (298), Expect = 4e-31
 Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 11/288 (3%)

Query: 312 RIDFEAR-----GRQELEKRVAERTADLEGLNTRLKNAVL---ERENAQQEAVRAQDELV 363
           R  FE+R     GR+ +      R  D +G ++   ++V+   E++ A+    +  ++L 
Sbjct: 437 RSGFESRLRHRDGREVITMVYTARLIDADGRHSGWMSSVVDITEQKRAELRQRQNDEQLQ 496

Query: 364 QAGKLSVLGTMSASISHELNQPLAAIRSYAENAEILLDHQRTEDARGNLKLIGELTGRMA 423
            A +L+ LG M+++++HELNQPL A+ ++A  A+   +         +L        R A
Sbjct: 497 HAQRLASLGEMASTLAHELNQPLMALSNFASAAKAFAEQGNQALLVSSLDETMAQAQRSA 556

Query: 424 SIIAHLRAFARRDRHAPESVALQPALDDALALLAKRRRAMAVELIRDLPEATLWVQAGET 483
            I+  +R F R+     E  A+   + + LALL    R   V     +P     V+    
Sbjct: 557 EIVRRIRGFVRQRTVGTEDCAVPALVTNVLALLQGEMRQRQVRAEVRVPANLPPVRGDRV 616

Query: 484 RLRQVLGNLLANALDALTEKANPRRLW-LSAEQRDDCVYLYIRDNGPGFSRQALEHAKEP 542
            L QVL NLL+N+L A+      +R+  + AE  D  + + I D G G      E    P
Sbjct: 617 LLEQVLLNLLSNSLQAMQSTPQEKRVVEIDAEALDGRMRIRIADRGAGIDASLAEQVFAP 676

Query: 543 FFTTKTRTQGLGLGLAICESLMRALGGELLLANHPEGGAMLTLQLRVA 590
           FFTTK    GLGLGL IC +++ A  G L  A+ P GG + TL L ++
Sbjct: 677 FFTTKAG--GLGLGLNICRTIVEAHRGRLSFADRPGGGTVFTLALEIS 722