Pairwise Alignments

Query, 468 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 453 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Variovorax sp. SCN45

 Score =  426 bits (1094), Expect = e-123
 Identities = 227/450 (50%), Positives = 303/450 (67%), Gaps = 5/450 (1%)

Query: 8   DSRAQVILVDDDPHLRQALSQTLDLAGLKVVALAEAQGLAERIEADWPGVVVSDIRMPGI 67
           D   +V+LV+DD  +R + +Q L LAG +V A A A+     I    P +V+SD+R+PG+
Sbjct: 4   DPAIRVLLVEDDEDVRLSTTQVLTLAGFEVEAFASAERARAHISFGVPAIVISDVRLPGM 63

Query: 68  DGLQLLEQLHGRDSELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFATDALLDSVRRALA 127
            G + L +LH  D+ELPV+L+TGHG + +AVQAMR GAYDF+EKPF+++ L+  VR A+ 
Sbjct: 64  SGTEWLGELHTADAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLVAIVRHAIE 123

Query: 128 LRRLVLDNRSLRLALSDRQQLATRLVGHSPAMLRLREQIGALAGTRADVLILGETGAGKE 187
            R+L L  R+LR AL +   + + L+G S  M ++R  +  LA T ADVLI GETG GKE
Sbjct: 124 RRQLTLQVRTLRDALENWNGIQSVLIGRSAQMQQVRRTVMTLAETSADVLIYGETGTGKE 183

Query: 188 VVARALHDLSSRSEGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGT 247
           +VA+ LH  S R    FV +N G L E++ ESELFGHE GAFT A + R+GKFE+ANGGT
Sbjct: 184 LVAQCLHAHSERRRRHFVPLNCGGLPEALAESELFGHEAGAFTSANRARVGKFEYANGGT 243

Query: 248 LFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRA 307
           LFLDEIESM + VQ+KLLR LQER +ER+G N+ IP D R++AA+KEDL++ +D+ +FRA
Sbjct: 244 LFLDEIESMPMPVQIKLLRALQERSIERIGSNKAIPFDCRVVAASKEDLKEMSDRQKFRA 303

Query: 308 DLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASQRHGLSPHALQPAQRALLLRHDWPG 367
           DLYYRL VA + +PPLRER +DI +LF+HF   A+ R+  +   L  AQ A L+ + WPG
Sbjct: 304 DLYYRLGVAFIELPPLRERREDIPLLFEHFTLLAANRYERAAQPLTNAQLADLMAYAWPG 363

Query: 368 NVRELQNAAERFALGL--ELALDGQAPSAAAPAAPMLSGNLSEQVEQFERSLIAAELAQP 425
           NVREL+N A+RF LGL  E     +      PA P     L +QVE FER++I   L + 
Sbjct: 364 NVRELRNVADRFVLGLLGERLTQTRGTGEGLPALPRA---LPQQVEAFERAVIVEALRKH 420

Query: 426 HGSMRSLAEALGIPRKTLHDKLRKHGLNFD 455
            G   + A AL I R+TLHDKLRK  +  D
Sbjct: 421 KGDQPATAAALAIARQTLHDKLRKFDILAD 450