Pairwise Alignments

Query, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

Subject, 275 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  148 bits (374), Expect = 1e-40
 Identities = 84/234 (35%), Positives = 133/234 (56%)

Query: 20  VLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGWRAGLGFVIGGS 79
           VL L +W+     G +S   L  PSAV++A  +L+ +G +W H+A S  R+  G V+  +
Sbjct: 34  VLFLLLWEALPRLGIVSDAYLSPPSAVLAAIGQLLDNGLLWKHVAASLQRSLWGLVLASA 93

Query: 80  IGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFP 139
            G+VLG + G       ++D  +Q+ R     AL P+ IL+ GI E +K+ ++   + +P
Sbjct: 94  AGVVLGLLIGGFRRLAAIVDPLLQLFRQTSAFALFPVFILFLGIGELSKVAIIFWASFWP 153

Query: 140 IYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWLTLIV 199
           + L+T  G++ VD  LV  A S G S   +F +V+LP +LPSI  GVR A  +    L+ 
Sbjct: 154 VLLSTVSGVKQVDRLLVNSALSMGASRRFIFFKVVLPASLPSIFTGVRLAGAYSITALVA 213

Query: 200 AETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVWLRW 253
           AE I A++G+G+L +N++E  Q   +   I++ AVLG + +     LER  LRW
Sbjct: 214 AEMIGAHSGLGFLTLNSQETFQIPTMYAGILMLAVLGLLLNYLLALLERHLLRW 267