Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 319 a.a., Putative aliphatic sulfonates-binding protein from Xanthobacter sp. DMC5

 Score =  369 bits (948), Expect = e-107
 Identities = 186/317 (58%), Positives = 229/317 (72%), Gaps = 4/317 (1%)

Query: 1   MRTVFLRRGLVAL---FAAAVSFGAI-TQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAE 56
           M T   RR    L    A A++ GA   +AQ + +RIGYQKYGTL+LLK KG LE  L  
Sbjct: 1   MSTGITRRHFAVLASGLAGALALGAAPARAQEKVVRIGYQKYGTLILLKNKGLLEPLLKP 60

Query: 57  QGVQVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAI 116
            G  V+W EFP GPQLLE LN G++DFG TGE PP+FAQAAGA L+YV YEP AP  EAI
Sbjct: 61  LGYSVKWAEFPAGPQLLEALNAGAVDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPQGEAI 120

Query: 117 LVPKGSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFE 176
           LVPK SP+++V DLKGK V LNKGSNVHYLLV+ALE AG+ YSDI+  YL PADARAAFE
Sbjct: 121 LVPKDSPLKTVADLKGKTVALNKGSNVHYLLVKALEKAGVPYSDIKTAYLTPADARAAFE 180

Query: 177 RGSVDAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEV 236
           RGSVDAW IWDP+QAAAE+ + AR L DG G+V N+QFYL+TR++  Q P V++ +++ V
Sbjct: 181 RGSVDAWAIWDPFQAAAEKTIDARQLADGTGIVSNYQFYLSTRSFVDQAPQVVDVLLKGV 240

Query: 237 RAVGEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQA 296
             VG W +ANP+    + +PL+G+PA I   ++ RQ Y   P+TPEV AAQQ++AD F A
Sbjct: 241 AEVGAWVKANPKAAAAEFSPLIGIPAPILEVALARQQYDVKPITPEVAAAQQQVADAFLA 300

Query: 297 LKLIPKPLSIKDVIWTP 313
           L LIPKP+ I D +  P
Sbjct: 301 LGLIPKPIRIADALRAP 317