Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 322 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  559 bits (1441), Expect = e-164
 Identities = 284/322 (88%), Positives = 300/322 (93%), Gaps = 1/322 (0%)

Query: 1   MRTVFLRRGLVALFAAAVSFGAITQAQA-ESLRIGYQKYGTLVLLKAKGTLEKRLAEQGV 59
           MRTV LRRGLVALFAAAVSFGAI QAQA E+LRIGYQKYGTLVLLKAKGTLEKRLA QGV
Sbjct: 1   MRTVILRRGLVALFAAAVSFGAIVQAQAAETLRIGYQKYGTLVLLKAKGTLEKRLAAQGV 60

Query: 60  QVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVP 119
            VQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAP SEAILVP
Sbjct: 61  NVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPTSEAILVP 120

Query: 120 KGSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGS 179
           K SPI+SV +LKGKKVVLNKGSNVHYLLVRALEDAGLKY+D+Q V+LPPADARAAFERGS
Sbjct: 121 KDSPIKSVAELKGKKVVLNKGSNVHYLLVRALEDAGLKYTDVQAVFLPPADARAAFERGS 180

Query: 180 VDAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAV 239
           VDAWVIWDPYQAAAE+QLQARTLRDG G+ DNHQFYLAT+ YA QHP VI  ++EEVRAV
Sbjct: 181 VDAWVIWDPYQAAAEKQLQARTLRDGTGIADNHQFYLATKPYAQQHPEVIKALVEEVRAV 240

Query: 240 GEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKL 299
           GEWS+ANPQEVT+QVAPLLGLPA ITLTSVKRQGYGA  LTPEVVAAQQKIAD+F  LKL
Sbjct: 241 GEWSKANPQEVTEQVAPLLGLPADITLTSVKRQGYGALFLTPEVVAAQQKIADSFYQLKL 300

Query: 300 IPKPLSIKDVIWTPPAKVASAP 321
           IPKPL+IKDVIWTPPA VA+AP
Sbjct: 301 IPKPLNIKDVIWTPPAAVATAP 322