Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  261 bits (667), Expect = 2e-74
 Identities = 141/313 (45%), Positives = 188/313 (60%), Gaps = 6/313 (1%)

Query: 6   LRRGLVALFAAAVSFGAITQAQA-ESLRIGYQKYGTLV-LLKAKGTLEKRLAEQGVQVQW 63
           +RR L A+ A  ++F     A+A E++RIGYQK  TL+ LLK +GTLEK L    + V W
Sbjct: 3   IRRPLAAV-AGLLAFSVAVSAEAQETVRIGYQKSSTLITLLKTQGTLEKALKADNIDVSW 61

Query: 64  TEFPGGPQLLEGLNVGSIDFGV-TGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKGS 122
            EFP G  LLE LNVG++D      +T P+FAQAA A L Y A E P+P ++AI+V K S
Sbjct: 62  HEFPSGLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPSAQAIVVRKDS 121

Query: 123 PIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVDA 182
           PIQ + DLKGKK+ + K +  HYLL+ AL   GL++SDI P YL PAD RAAFE   VDA
Sbjct: 122 PIQQLADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGRAAFENNKVDA 181

Query: 183 WVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGEW 242
           WV W+P+  + ++QL  RTL DG GL    ++YL    YA  HP V+  V  ++   G+W
Sbjct: 182 WVTWEPFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHPDVLKVVYAQLEKTGQW 241

Query: 243 SQANPQEVTDQVAPLLG-LPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLIP 301
            + +PQ+    + PL G L       +   + Y   P+T + +  QQKIAD F    L+P
Sbjct: 242 VKTHPQDAAKVLGPLWGNLDVATVEAANAHRSYQVQPVTIDQLGEQQKIADAFFKAGLLP 301

Query: 302 KPLSIKDV-IWTP 313
           K +  KDV  W P
Sbjct: 302 KAVDAKDVQTWKP 314