Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 342 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  124 bits (312), Expect = 3e-33
 Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 9/288 (3%)

Query: 24  TQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAEQGVQVQWTEFPGGPQLLEGLNVGSIDF 83
           T     +LR+G  K     LL A G      A    ++ W E   G   +E +N  ++D 
Sbjct: 44  TDLSGVTLRVGTYKGLWRPLLTASGQ-----ANTPYKIDWRELNNGVLHIEAINGDALDL 98

Query: 84  GVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKGSPIQSVKDLKGKKVVLNKGSNV 143
           G   E PPVFA    + +  VA      +++A L  K +PI+++ D KGK+V   + +  
Sbjct: 99  GSGSEIPPVFAARQKSSVRLVAVTHEDLNNQATLARKDAPIRTIADFKGKRVGYVRATTS 158

Query: 144 HYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVDAWVIWDPYQAAAEQQLQARTLR 203
           HY L + L +AGL +SDIQ V L P+D  +AF RG +DAW I+      A  Q  AR ++
Sbjct: 159 HYYLAKQLAEAGLSFSDIQAVSLTPSDGLSAFARGDLDAWAIYGYNGQLARIQYGARVIK 218

Query: 204 DGKGLVDNHQFYLATRNYATQHP--AVINTVIEEVRAVGEWSQANPQEVTDQVAPLLGLP 261
            G G +  +    A        P  A +  +++ ++    WS  N        +    +P
Sbjct: 219 TGVGYLSGNFPIYANPRALDDAPRRAALADLLQRLQRAFAWSNGNFLTYARAQSAETRVP 278

Query: 262 AG--ITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLIPKPLSIK 307
            G  + L + +   Y   P++  VV + Q +ADTF  + ++  P  ++
Sbjct: 279 VGDIVELFNGRSSDYSLGPVSDAVVRSHQDVADTFLKIGVLDGPADVR 326