Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  260 bits (665), Expect = 3e-74
 Identities = 136/313 (43%), Positives = 194/313 (61%), Gaps = 5/313 (1%)

Query: 7   RRGLVALFAAAVSFGAITQAQAE---SLRIGYQKYGTLV-LLKAKGTLEKRLAEQGVQVQ 62
           RR  +A  AA  S   + Q       ++R+GYQK  TL+ +LKA+G LEK+LA     + 
Sbjct: 10  RRTAIATLAALGSGAVLAQGAGSRPVTVRLGYQKSSTLIAVLKAQGVLEKQLAPLNATLS 69

Query: 63  WTEFPGGPQLLEGLNVGSIDFGV-TGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKG 121
           W EF  G  LLE LN+ ++D      +T PVFAQAAGADL ++A E P+P ++AI+V + 
Sbjct: 70  WHEFTSGLPLLEALNLDNLDISADVADTVPVFAQAAGADLTFIAQEAPSPAAQAIVVRED 129

Query: 122 SPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVD 181
           SPI++V DLKGKKV   K +  HYLL+ AL+ AGL + DI+P YL PAD RAAFE+G++D
Sbjct: 130 SPIKTVADLKGKKVGFAKAAGAHYLLIAALDKAGLSFRDIEPAYLTPADGRAAFEKGAID 189

Query: 182 AWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGE 241
           AWV+WDP+ AAA++Q + R L DG G+    ++YLA+  +A   P V+  V  E+   G+
Sbjct: 190 AWVVWDPFLAAAQRQSKVRVLADGAGIASYQRYYLASTKFAKARPDVLRVVYAELEKTGK 249

Query: 242 WSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLIP 301
           W + NP++    +AP+ GL A     +  R+ Y   P+  E +  QQ+IAD F A KL+P
Sbjct: 250 WVKQNPKDAATLLAPVWGLDAATIEQANGRRSYAVRPVVAEGLTEQQRIADAFFAEKLLP 309

Query: 302 KPLSIKDVIWTPP 314
           + +   +V    P
Sbjct: 310 RKIDALNVALFKP 322